• Novel genes

    Novel genes

    Genes that have been predicted by Ensembl on the basis of similarity to protein or cDNA sequences.

  • Vector

    Vector

    A small DNA (ds-circular) molecule that can be used to deliver DNA into a cell.

  • Restriction enzymes

    Restriction enzymes

    Enzymes are involved in the breaking of DNA molecules at specific site.

  • DNA ligases

    DNA ligases

    Which join or recombine DNA fragments (ligation).

  • Recombinant DNA

    Recombinant DNA

    A form of artificial DNA that is created by combining two or more sequences that would not normally occur together.

  • Polymerases

    Polymerases

    Enzymes are involved in the building or synthesis of nucleic acids.

Saturday, 29 September 2012

Restriction enzymes

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Restriction enzymes are classified as endonucleases. Their biochemical activity is the hydrolysis ("digestion") of the phosphodiester backbone at specific sites in a DNA sequence. By "specific" we mean that an enzyme will only digest a DNA molecule after locating a particular sequence.


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Why is rDNA important?

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1. Better Crops (drought & heat resistance)
2. Recombinant Vaccines (ie. Hepatitis B)
3. Prevention and cure of sickle cell anemia
4. Prevention and cure of cystic fibrosis
5. Production of clotting factors
6. Production of insulin
7. Production of recombinant pharmaceuticals
8. Plants that produce their own insecticides
9. Germ line and somatic gene therapy


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How is Recombinant DNA made?

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There are three different methods by which Recombinant DNA is made. 
1. Transformation
The first step in transformation is to select a piece of DNA to be inserted into a vector. The second step is to cut that piece of DNA with a restriction enzyme and then ligate the DNA insert into the vector with DNA Ligase. The insert contains a selectable marker which allows for identification of recombinant molecules. An antibiotic marker is often used so a host cell without a vector dies when exposed to a certain antibiotic, and the host with the vector will live because it is resistant.
The vector is inserted into a host cell, in a process called transformation. One example of a possible host cell is E. Coli. The host cells must be specially prepared to take up the foreign DNA.
Selectable markers can be for antibiotic resistance, color changes, or any other characteristic which can distinguish transformed hosts from untransformed hosts.
2. Non-Bacterial Transformation
This is a process very similar to Transformation, which was described above. The only difference between the two is non-bacterial does not use bacteria such as E. Coli for the host.
In microinjection, the DNA is injected directly into the nucleus of the cell being transformed. In biolistics, the host cells are bombarded with high velocity microprojectiles, such as particles of gold or tungsten that have been coated with DNA.
3. Phage Introduction
Phage introduction is the process of transfection, which is equivalent to transformation, except a phage is used instead of bacteria. In vitro packagings of a vector is used. This uses lambda or MI3 phages to produce phage plaques which contain recombinants. The recombinants that are created can be identified by differences in the recombinants and non-recombinants using various selection methods.





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Restriction enzymes are used to make recombinant DNA

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1. Cut DNA at specific DNA sequences
§             Symmetrical series of four to eight  bases
§             Sticky Sticky or blunt ends or blunt ends
§              Restriction fragments-specific for each DNA
 2. Origin – bacteria
§            How do they protect their own DNA?
3. Combined by DNA ligase




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Recombinant DNA

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Recombinant DNA (rDNA) is a form of artificial DNA that is created by combining two or more sequences that would not normally occur together.
In terms of genetic modification, it is created through the introduction of relevant DNA into an existing organismal DNA, such as the plasmids of bacteria, to code for or alter different traits for a specific purpose, such as antibiotic resistance.
It differs from genetic recombination in that it does not occur through natural processes within the cell, but is engineered.
The recombinant DNA technique was first proposed by Peter Lobban, a graduate student, with A. Dale Kaiser at the Stanford University Department of Biochemistry.
The technique was then realized by Lobban and Kaiser; Jackson, Symons and Berg; and Stanley Norman Cohen, Chang, Herbert Boyer and Helling, in 1972–74.


Fig. Shows how a  Recombinant DNA molecule is form



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History of recombinant DNA technology

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Recombinant DNA technology is one of the recent  advances in biotechnology, which was developed by  two scientists named Boyer and Cohen in 1973.


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Recombinant DNA technology

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A series of procedures that are used to join together (recombine) DNA segments. A recombinant DNA molecule is constructed from segments of two or more different DNA molecules. Under certain conditions, a recombinant DNA molecule can enter a cell and replicate there, either on its own or after it has been integrated into a chromosome


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